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@Novartis

Novartis Open Source Initiative

Hosts open source projects for Novartis R&D. Details and instructions can be found on go/OSI (from Novartis network).

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Repositories

Showing 10 of 105 repositories
  • torchsurv Public

    Deep survival analysis made easy

    Novartis/torchsurv’s past year of commit activity
    Python 192 MIT 15 5 1 Updated Mar 23, 2026
  • UNIQUE Public

    A Python library for benchmarking uncertainty estimation and quantification methods for Machine Learning models predictions.

    Novartis/UNIQUE’s past year of commit activity
    Python 42 BSD-3-Clause 7 0 0 Updated Mar 23, 2026
  • pisces Public

    PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

    Novartis/pisces’s past year of commit activity
    Python 30 Apache-2.0 3 9 1 Updated Mar 20, 2026
  • RBesT Public

    Tool-set to support Bayesian evidence synthesis in R

    Novartis/RBesT’s past year of commit activity
    R 25 GPL-3.0 3 1 0 Updated Mar 13, 2026
  • WATCH Public

    An R-repository to implement a double robust version of the WATCH workflow published in Sechidis et al. (2024)

    Novartis/WATCH’s past year of commit activity
    R 3 MIT 1 0 0 Updated Mar 12, 2026
  • pdiff Public

    generative text-to-imaging model for predicting cell phenotypic responses to compounds via high content imaging

    Novartis/pdiff’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Mar 11, 2026
  • Pipeline_for_TES_AAV_LongReads Public

    This pipeline is designed for AAV integration site analysis using Target Enrichment Sequencing (TES) coupled with PacBio long-read sequencing. It enables the detection of integration site breakpoints and provides information on the structure of the integrated AAV vector genome to support the safety assessment of AAV-based gene therapies.

    Novartis/Pipeline_for_TES_AAV_LongReads’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 13, 2026
  • CompExonSpace Public

    This repository contains the code used to analyze the data presented in the manuscript "Specificity and exon target space of splicing modifying compounds”.

    Novartis/CompExonSpace’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 4, 2026
  • attrib-path Public

    Parse a simplified JSONPath-like syntax

    Novartis/attrib-path’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 4 Updated Jan 24, 2026
  • Novartis.github.io Public

    Public gallery of BR Open Source projects

    Novartis/Novartis.github.io’s past year of commit activity
    HTML 2 3 0 2 Updated Jan 19, 2026
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