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    40 repositories

    • Bizard

      Public
      Bizard: A Biomedical Visualization Atlas. https://openbiox.github.io/Bizard/
      R
      •10•41•3•1•Updated Apr 11, 2026Apr 11, 2026

    • UCSCXenaShiny

      Public
      📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/; Book: https://lishensuo.github.io/UCSCXenaShiny_Book; App online: https…
      cranrr-package
      cranrr-packageshiny-appscancer-datasetucsc-xena
      R
      •
      GNU General Public License v3.0
      •32•104•7•0•Updated Feb 8, 2026Feb 8, 2026

    • weekly

      Public
      生信爱好者周刊（每周日发布）
      bioinformaticsweeklyfree-journals
      bioinformaticsweeklyfree-journals
      HTML
      •30•460•120•0•Updated Dec 29, 2025Dec 29, 2025

    • hiplot-org-plugins

      Public
      Open-source plugins of Hiplot (ORG) visualization platform.
      R
      •
      Other
      •6•20•1•0•Updated May 4, 2025May 4, 2025

    • hiplot-org-cover

      Public
      Cover images of Hiplot (ORG) plugins.
      Shell
      •0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

    • HemaScopeR

      Public
      A Specialized Bioinformatics Toolkit Designed for Analyzing both Single-cell and Spatial Transcriptome Sequencing Data from Hematopoietic Cells
      R
      •
      GNU General Public License v3.0
      •4•1•0•0•Updated Oct 23, 2024Oct 23, 2024

    • ceres

      Public
      Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens
      R
      •
      BSD 3-Clause "New" or "Revised" License
      •15•0•0•0•Updated Sep 4, 2024Sep 4, 2024

    • mkdocs-deploy-gh-pages

      Public
      GitHub Action to deploy an MkDocs site to GitHub Pages
      Shell
      •
      Apache License 2.0
      •91•0•0•0•Updated Dec 10, 2023Dec 10, 2023

    • openbiox

      Public
      Source code of openbiox homepage (under development status).
      Vue
      •
      Other
      •4•14•0•0•Updated May 9, 2023May 9, 2023

    • ligo

      Public
      A collection of functions of golang.
      Go
      •
      Other
      •0•2•0•0•Updated Apr 29, 2023Apr 29, 2023

    • summer-ospp

      Public
      Openbiox 开源之夏 2023 活动项目
      MIT License
      •0•4•0•0•Updated Apr 27, 2023Apr 27, 2023

    • galaxy

      Public
      Data intensive science for everyone.
      Python
      •
      Other
      •1.1k•0•0•0•Updated Apr 24, 2023Apr 24, 2023

    • alphafold

      Public
      Open source code for AlphaFold.
      Python
      •
      Apache License 2.0
      •2.6k•1•0•0•Updated Dec 13, 2022Dec 13, 2022

    • thesis-template

      Public
      A free library of templates for thesis writing.
      TeX
      •15•7•2•0•Updated Dec 13, 2022Dec 13, 2022

    • contribution

      Public
      A Tiny Contribution Table Generator Based on ggplot2 https://shixiangwang.shinyapps.io/contribution
      ggplot2researchcontribution
      ggplot2researchcontributioncredit
      R
      •
      Other
      •0•12•2•0•Updated Nov 4, 2022Nov 4, 2022

    • benchmark

      Public
      MIT License
      •0•0•0•0•Updated Jul 9, 2022Jul 9, 2022

    • Cookbook-for-R-Chinese

      Public
      :books:Cookbook for R 中文翻译
      rnotebookcookbooks
      rnotebookcookbooks
      TeX
      •67•141•0•0•Updated Mar 24, 2022Mar 24, 2022

    • AML-multistage-reproducibility-study-1

      Public
      AML Multistage Reproducibility Study
      HTML
      •
      GNU General Public License v3.0
      •28•0•0•0•Updated Mar 21, 2022Mar 21, 2022

    • AML-multistage-reproducibility-study

      Public
      AML Multistage Reproducibility Study
      HTML
      •
      GNU General Public License v3.0
      •28•0•0•0•Updated Mar 21, 2022Mar 21, 2022

    • awosome-bioinformatics

      Public
      A curated list of resources for learning bioinformatics.
      bioinformaticsnext-generation-sequencingdata-analysis
      bioinformaticsnext-generation-sequencingdata-analysis
      Creative Commons Zero v1.0 Universal
      •126•509•0•3•Updated Feb 23, 2022Feb 23, 2022

    • flarum

      Public archive
      Official forum of openbiox, a community-driven global bioinformatics innovation collaboration group.
      PHP
      •
      MIT License
      •1•6•0•0•Updated Jun 30, 2020Jun 30, 2020

    • slides

      Public
      This is where we will store all of the materials for openbiox::slides!
      0•2•0•0•Updated Jun 1, 2020Jun 1, 2020

    • Awesome-Bioinformatics-Workflow-Chinese

      Public
      Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目
      18•27•9•7•Updated Mar 7, 2020Mar 7, 2020

    • gists

      Public
      Community-curated gists for various bioinformatics data analysis tasks (e.g. Shell, R, Python, and others).
      R
      •
      Apache License 2.0
      •0•2•0•0•Updated Nov 28, 2019Nov 28, 2019

    • yq

      Public
      An R client to access 'YuQue' (语雀) 'API'
      api-clientyuque
      api-clientyuque
      R
      •
      Other
      •0•2•1•0•Updated Oct 23, 2019Oct 23, 2019

    • py4ds-CN

      Public
      📚利用Python进行数据处理第二版中文gitbook，用于个人学习
      data-sciencegitbookpython3
      data-sciencegitbookpython3chinese-translation
      TeX
      •
      MIT License
      •13•41•1•0•Updated Oct 21, 2019Oct 21, 2019

    • wiki

      Public
      :book:Let's get started!
      wikiopenbiox
      wikiopenbiox
      JavaScript
      •7•15•0•0•Updated Oct 21, 2019Oct 21, 2019

    • gatk

      Public
      Official code repository for GATK versions 4 and up
      Java
      •
      BSD 3-Clause "New" or "Revised" License
      •625•0•0•0•Updated Oct 19, 2019Oct 19, 2019

    • bioinformatics-100-days

      Public
      Learn and practice the bioinformatics skills in 100 Days.
      HTML
      •28•81•0•0•Updated Sep 26, 2019Sep 26, 2019

    • spack

      Public
      A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
      Python
      •
      Other
      •2.4k•2•0•0•Updated Aug 13, 2019Aug 13, 2019
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